ZEISS arivis Pro is a modular desktop software platform designed for advanced analysis and visualization of multi-channel 2D, 3D, and 4D microscopy images, regardless of dataset size. It enables researchers to create flexible, customizable image analysis pipelines without coding, supporting a wide range of imaging modalities including confocal, light sheet, super-resolution, electron microscopy, and X-ray. The software features AI-assisted segmentation and object detection, automated tracking and lineage analysis, and high-content analysis (HCA) for cell painting and phenotyping. ZEISS arivis Pro offers native support for ZEISS CZI files and many other formats, ensuring seamless integration with diverse imaging systems. Performance optimizations allow rapid processing of large datasets, including deep learning-based segmentation and visualization. The platform includes a VR toolkit for interactive proofreading and correction, and supports collaborative workflows with ZEISS arivis Hub integration. It is suitable for scientific and industrial applications requiring reliable, reproducible, and scalable image analysis.

Key Features

Modular Image Analysis Pipelines Create and customize workflows for diverse research needs.

• Flexible pipeline creation without coding.
• Supports 2D, 3D, and 4D multi-channel images.

AI-Assisted Segmentation and Object Detection Automate complex image analysis tasks.

• Pretrained AI models for neuronal spine tracing and cell segmentation.
• Instance segmentation for object-level analysis.

Tracking and Lineage Analysis Analyze movement and development in biological datasets.

• Automated and manual tracking of cells, particles, and organisms in 2D/3D.
• Lineage analysis for developmental biology.

High-Content Analysis (HCA) Extract rich feature sets for cell painting and phenotyping.

• Enhanced cell measurement capabilities.
• Supports large-scale HCA workflows.

Performance Optimization and Scalability Efficiently process large and complex datasets.

• Handles datasets of hundreds of GBs to TBs.
• Optimized for deep learning and virtual machine environments.

Visualization and VR Toolkit Advanced tools for data exploration and correction.

• Enhanced 3D/4D surface rendering.
• VR toolkit for interactive proofreading and correction.

File Format and System Integration Seamless compatibility with diverse imaging platforms.

• Native support for ZEISS CZI and other formats.
• Integration with ZEISS arivis Hub for collaborative workflows.

Benefits

Accelerated Research and Reliable Results Streamlines image analysis for faster, reproducible outcomes.

• Reduces manual workload with automation and AI.
• Ensures consistency across imaging and analysis platforms.

Scalability and Flexibility Adapts to evolving research needs and data volumes.

• Handles virtually unlimited dataset sizes.
• Modular architecture supports diverse applications.

Collaboration and Interactivity Facilitates teamwork and data validation.

• Integrates with collaborative platforms.
• VR toolkit enables efficient result correction.